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dc.contributor.authorSun, Min
dc.contributor.authorHuang, Dejun
dc.contributor.authorZhang, Ailing
dc.contributor.authorKhan, Imran
dc.contributor.authorYan, Haidong
dc.contributor.authorWang, Xiaoshan
dc.contributor.authorZhang, Xinquan
dc.contributor.authorZhang, Jian
dc.contributor.authorHuang, Linkai
dc.date.accessioned2020-07-13T11:47:17Z
dc.date.available2020-07-13T11:47:17Z
dc.date.issued2020-07-08
dc.identifier.citationBMC Plant Biology. 2020 Jul 08;20(1):323
dc.identifier.urihttp://hdl.handle.net/10919/99344
dc.description.abstractAbstract Background Heat and drought are serious threats for crop growth and development. As the sixth largest cereal crop in the world, pearl millet can not only be used for food and forage but also as a source of bioenergy. Pearl millet is highly tolerant to heat and drought. Given this, it is considered an ideal crop to study plant stress tolerance and can be used to identify heat-resistant genes. Results In this study, we used Pacbio sequencing data as a reference sequence to analyze the Illumina data of pearl millet that had been subjected to heat and drought stress for 48 h. By summarizing previous studies, we found 26,299 new genes and 63,090 new transcripts, and the number of gene annotations increased by 20.18%. We identified 2792 transcription factors and 1223 transcriptional regulators. There were 318 TFs and 149 TRs differentially expressed under heat stress, and 315 TFs and 128 TRs were differentially expressed under drought stress. We used RNA sequencing to identify 6920 genes and 6484 genes differentially expressed under heat stress and drought stress, respectively. Conclusions Through Pacbio sequencing, we have identified more new genes and new transcripts. On the other hand, comparing the differentially expressed genes under heat tolerance with the DEGs under drought stress, we found that even in the same pathway, pearl millet responds with a different protein.
dc.format.mimetypeapplication/pdf
dc.language.isoen
dc.rightsCreative Commons Attribution 4.0 International*
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/*
dc.titleTranscriptome analysis of heat stress and drought stress in pearl millet based on Pacbio full-length transcriptome sequencingen_US
dc.typeArticle - Refereed
dc.date.updated2020-07-12T03:51:03Z
dc.rights.holderThe Author(s)
dc.title.serialBMC Plant Biology
dc.identifier.doihttps://doi.org/10.1186/s12870-020-02530-0
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Creative Commons Attribution 4.0 International
License: Creative Commons Attribution 4.0 International