Changes in genetic diversity and differentiation in Red-cockaded woodpeckers (Dryobates borealis) over the past century

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dc.contributor.authorMiller, Mark P.en
dc.contributor.authorVilstrup, Julia T.en
dc.contributor.authorMullins, Thomas D.en
dc.contributor.authorMcDearman, Willen
dc.contributor.authorWalters, Jeffrey R.en
dc.contributor.authorHaig, Susan M.en
dc.contributor.departmentBiological Sciencesen
dc.date.accessioned2020-06-26T19:41:02Zen
dc.date.available2020-06-26T19:41:02Zen
dc.date.issued2019-05en
dc.description.abstractRed-cockaded woodpeckers (RCW; Dryobates borealis) declined after human activities reduced their fire-maintained pine ecosystem to <3% of its historical range in the southeastern United States and degraded remaining habitat. An estimated 1.6 million RCW cooperative breeding groups declined to about 3,500 groups with no more than 10,000 birds by 1978. Management has increased RCW population abundances since they were at their lowest in the 1990s. However, no range-wide study has been undertaken since then to investigate the impacts of this massive bottleneck or infer the effects of conservation management and recent demographic recoveries. We used mitochondrial DNA sequences (mtDNA) and nine nuclear microsatellite loci to determine if range-wide demographic declines resulted in changes to genetic structure and diversity in RCW by comparing samples collected before 1970 (mtDNA data only), between 1992 and 1995 (mtDNA and microsatellites), and between 2010 and 2014 (mtDNA and microsatellites). We show that genetic diversity has been lost as detected by a reduction in the number of mitochondrial haplotypes. This reduction was apparent in comparisons of pre-1970 mtDNA data with data from the 1992-1995 and 2010-2014 time points, with no change between the latter two time points in mtDNA and microsatellite analyses. The mtDNA data also revealed increases in range-wide genetic differentiation, with a genetically panmictic population present throughout the southeastern United States in the pre-1970s data and subsequent development of genetic structure that has remained unchanged since the 1990s. Genetic structure was also uncovered with the microsatellite data, which like the mtDNA data showed little change between the 1992-1995 and 2010-2014 data sets. Temporal haplotype networks revealed a consistent, star-like phylogeny, suggesting that despite the overall loss of haplotypes, no phylogenetically distinct mtDNA lineages were lost when the population declined. Our results may suggest that management during the last two decades has prevented additional losses of genetic diversity.en
dc.description.adminPublic domain – authored by a U.S. government employeeen
dc.description.notesVillum Fonden, Grant/Award Number: VKR023371; Strategic Environmental Research and Defense Program, Grant/Award Number: RC-2708; U.S. Geological Surveyen
dc.description.sponsorshipVillum Fonden [VKR023371]; Strategic Environmental Research and Defense Program [RC-2708]; U.S. Geological SurveyUnited States Geological Surveyen
dc.format.mimetypeapplication/pdfen
dc.identifier.doihttps://doi.org/10.1002/ece3.5135en
dc.identifier.issn2045-7758en
dc.identifier.issue9en
dc.identifier.pmid31110690en
dc.identifier.urihttp://hdl.handle.net/10919/99150en
dc.identifier.volume9en
dc.language.isoenen
dc.rightsCreative Commons CC0 1.0 Universal Public Domain Dedicationen
dc.rights.urihttp://creativecommons.org/publicdomain/zero/1.0/en
dc.subjectDryobates borealisen
dc.subjectendangered speciesen
dc.subjectmicrosatelliteen
dc.subjectmitochondrial DNA sequencesen
dc.subjectRed-cockaded woodpeckeren
dc.subjecttemporal changeen
dc.titleChanges in genetic diversity and differentiation in Red-cockaded woodpeckers (Dryobates borealis) over the past centuryen
dc.title.serialEcology and Evolutionen
dc.typeArticle - Refereeden
dc.type.dcmitypeTexten
dc.type.dcmitypeStillImageen

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