Research articles, presentations, and other scholarship

Recent Submissions

  • Modulation of nucleosomal DNA accessibility via charge-altering post-translational modifications in histone core 

    Fenley, Andrew T; Anandakrishnan, Ramu; Kidane, Yared H; Onufriev, Alexey V (2018-03-16)
    Abstract Background Controlled modulation of nucleosomal DNA accessibility via post-translational modifications (PTM) is a critical component to many cellular functions. ...
  • Systematic uncertainties in long-baseline neutrino-oscillation experiments 

    Ankowski, AM; Mariani, C (IOP PUBLISHING LTD, 2017-05-01)
  • Using L/E Oscillation Probability Distributions 

    Aguilar-Arevalo, AA; Brown, BC; Bugel, L; Cheng, G; Church, ED; Conrad, JM; Dharmapalan, R; Djurcic, Z; Finley, DA; Ford, R; Garcia, FG; Garvey, GT; Grange, J; Huelsnitz, W; Ignarra, C; Imlay, R; Johnson, RA; Karagiorgi, G; Katori, T; Kobilarcik, T; Louis, WC; Mariani, C; Marsh, W; Mills, GB; Mirabal, J; Moore, CD; Mousseau, J; Nienaber, P; Osmanov, B; Pavlovic, Z; Perevalov, D; Polly, CC; Ray, H; Roe, BP; Russell, AD; Shaevitz, MH; Spitz, J; Stancu, I; Tayloe, R; Water, RGVD; White, DH; Wickremasinghe, DA; Zeller, GP; Zimmerman, ED
    This paper explores the use of $L/E$ oscillation probability distributions to compare experimental measurements and to evaluate oscillation models. In this case, $L$ is the distance of neutrino travel and $E$ is a measure ...
  • Improved Search for $\bar ν_μ\rightarrow \bar ν_e$ Oscillations in the MiniBooNE Experiment 

    Collaboration, TM; Aguilar-Arevalo, AA; Brown, BC; Bugel, L; Cheng, G; Church, ED; Conrad, JM; Dharmapalan, R; Djurcic, Z; Finley, DA; Ford, R; Garcia, FG; Garvey, GT; Grange, J; Huelsnitz, W; Ignarra, C; Imlay, R; Johnson, RA; Karagiorgi, G; Katori, T; Kobilarcik, T; Louis, WC; Mariani, C; Marsh, W; Mills, GB; Mirabal, J; Moore, CD; Mousseau, J; Nienaber, P; Osmanov, B; Pavlovic, Z; Perevalov, D; Polly, CC; Ray, H; Roe, BP; Russell, AD; Shaevitz, MH; Spitz, J; Stancu, I; Tayloe, R; Water, RGVD; White, DH; Wickremasinghe, DA; Zeller, GP; Zimmerman, ED
    The MiniBooNE experiment at Fermilab reports results from an analysis of $\bar \nu_e$ appearance data from $11.27 \times 10^{20}$ protons on target in antineutrino mode, an increase of approximately a factor of two over ...
  • Improved measurement of neutral current coherent pi(0) production on carbon in a few-GeV neutrino beam 

    Kurimoto, Y; Alcaraz-Aunion, JL; Brice, SJ; Bugel, L; Catala-Perez, J; Cheng, G; Conrad, JM; Djurcic, Z; Dore, U; Finley, DA; Franke, AJ; Giganti, C; Gomez-Cadenas, JJ; Guzowski, P; Hanson, A; Hayato, Y; Hiraide, K; Jover-Manas, G; Karagiorgi, G; Katori, T; Kobayashi, YK; Kobilarcik, T; Kubo, H; Louis, WC; Loverre, PF; Ludovici, L; Mahn, KBM; Mariani, C; Masuike, S; Matsuoka, K; McGary, VT; Metcalf, W; Mills, GB; Mitsuka, G; Miyachi, Y; Mizugashira, S; Moore, CD; Nakajima, Y; Nakaya, T; Napora, R; Nienaber, P; Orme, D; Otani, M; Russell, AD; Sanchez, F; Shaevitz, MH; Shibata, T-A; Sorel, M; Stefanski, RJ; Takei, H; Tanaka, H-K; Tanaka, M; Tayloe, R; Taylor, IJ; Tesarek, RJ; Uchida, Y; Van de Water, R; Walding, JJ; Wascko, MO; White, HB; Wilking, MJ; Yokoyama, M; Zeller, GP; Zimmerman, ED (AMER PHYSICAL SOC, 2010-06-16)
  • Measurement of single charged pion production in the charged-current interactions of neutrinos in a 1.3 GeV wide band beam 

    Rodriguez, A; Whitehead, L; Alcaraz, JL; Andringa, S; Aoki, S; Argyriades, J; Asakura, K; Ashie, R; Berghaus, F; Berns, H; Bhang, H; Blondel, A; Borghi, S; Bouchez, J; Burguet-Castell, J; Casper, D; Catala, J; Cavata, C; Cervera, A; Chen, SM; Cho, KO; Choi, JH; Dore, U; Espinal, X; Fechner, M; Fernandez, E; Fujii, Y; Fukuda, Y; Gomez-Cadenas, J; Gran, R; Hara, T; Hasegawa, M; Hasegawa, T; Hayato, Y; Helmer, RL; Hiraide, K; Hosaka, J; Ichikawa, AK; Iinuma, M; Ikeda, A; Ishida, T; Ishihara, K; Ishii, T; Ishitsuka, M; Itow, Y; Iwashita, T; Jang, HI; Jeon, EJ; Jeong, IS; Joo, KK; Jover, G; Jung, CK; Kajita, T; Kameda, J; Kaneyuki, K; Kato, I; Kearns, E; Kim, CO; Khabibullin, M; Khotjantsev, A; Kielczewska, D; Kim, JY; Kim, SB; Kitching, P; Kobayashi, K; Kobayashi, T; Konaka, A; Koshio, Y; Kropp, W; Kudenko, Y; Kuno, Y; Kurimoto, Y; Kutter, T; Learned, J; Likhoded, S; Lim, IT; Loverre, PF; Ludovici, L; Maesaka, H; Mallet, J; Mariani, C; Matsuno, S; Matveev, V; McConnel, K; McGrew, C; Mikheyev, S; Minamino, A; Mine, S; Mineev, O; Mitsuda, C; Miura, M; Moriguchi, Y; Moriyama, S; Nakadaira, T; Nakahata, M; Nakamura, K; Nakano, I; Nakaya, T; Nakayama, S; Namba, T; Nambu, R; Nawang, S; Nishikawa, K; Nitta, K; Nova, F; Novella, P; Obayashi, Y; Okada, A; Okumura, K; Oser, SM; Oyama, Y; Pac, MY; Pierre, F; Saji, C; Sakuda, M; Sanchez, F; Scholberg, K; Schroeter, R; Sekiguchi, M; Shiozawa, M; Shiraishi, K; Sitjes, G; Smy, M; Sobel, H; Sorel, M; Stone, J; Sulak, L; Suzuki, A; Suzuki, Y; Tada, M; Takahashi, T; Takenaga, Y; Takeuchi, Y; Taki, K; Takubo, Y; Tamura, N; Tanaka, M; Terri, R; T'Jampens, S; Tornero-Lopez, A; Totsuka, Y; Vagins, M; Walter, CW; Wang, W; Wilkes, RJ; Yamada, S; Yamada, Y; Yamamoto, S; Yanagisawa, C; Yershov, N; Yokoyama, H; Yokoyama, M; Yoo, J; Yoshida, M; Zalipska, J (AMER PHYSICAL SOC, 2008-08-01)
  • Measurement of the quasielastic axial vector mass in neutrino interactions on oxygen 

    Gran, R; Jeon, EJ; Aliu, E; Andringa, S; Aoki, S; Argyriades, J; Asakura, K; Ashie, R; Berghaus, F; Berns, H; Bhang, H; Blondel, A; Borghi, S; Bouchez, J; Burguet-Castell, J; Casper, D; Catala, J; Cavata, C; Cervera, A; Chen, SM; Cho, KO; Choi, JH; Dore, U; Espinal, X; Fechner, M; Fernandez, E; Fukuda, Y; Gomez-Cadenas, J; Hara, T; Hasegawa, M; Hasegawa, T; Hayashi, K; Hayato, Y; Helmer, RL; Hiraide, K; Hosaka, J; Ichikawa, AK; Iinuma, M; Ikeda, A; Inagaki, T; Ishida, T; Ishihara, K; Ishii, T; Ishitsuka, M; Itow, Y; Iwashita, T; Jang, HI; Jeong, IS; Joo, KK; Jover, G; Jung, CK; Kajita, T; Kameda, J; Kaneyuki, K; Kato, I; Kearns, E; Kerr, D; Kim, CO; Khabibullin, M; Khotjantsev, A; Kielczewska, D; Kim, JY; Kim, SB; Kitching, P; Kobayashi, K; Kobayashi, T; Konaka, A; Koshio, Y; Kropp, W; Kubota, J; Kudenko, Y; Kuno, Y; Kurimoto, Y; Kutter, T; Learned, J; Likhoded, S; Lim, IT; Loverre, PF; Ludovici, L; Maesaka, H; Mallet, J; Mariani, C; Matsuno, S; Matveev, V; Mahn, KBM; McGrew, C; Mikheyev, S; Minamino, A; Mine, S; Mineev, O; Mitsuda, C; Miura, M; Moriguchi, Y; Morita, T; Moriyama, S; Nakadaira, T; Nakahata, M; Nakamura, K; Nakano, I; Nakaya, T; Nakayama, S; Namba, T; Nambu, R; Nawang, S; Nishikawa, K; Nitta, K; Nova, F; Novella, P; Obayashi, Y; Okada, A; Okumura, K; Oser, SM; Oyama, Y; Pac, MY; Pierre, F; Rodriguez, A; Saji, C; Sakuda, M; Sanchez, F; Sarrat, A; Sasaki, T; Sato, H; Scholberg, K; Schroeter, R; Sekiguchi, M; Shiozawa, M; Shiraishi, K; Sitjes, G; Smy, M; Sobel, H; Sorel, M; Stone, J; Sulak, L; Suzuki, A; Suzuki, Y; Takahashi, T; Takenaga, Y; Takeuchi, Y; Taki, K; Takubo, Y; Tamura, N; Tanaka, M; Terri, R; T'Jampens, S; Tornero-Lopez, A; Totsuka, Y; Ueda, S; Vagins, M; Whitehead, L; Walter, CW; Wang, W; Wilkes, RJ; Yamada, S; Yamamoto, S; Yanagisawa, C; Yershov, N; Yokoyama, H; Yokoyama, M; Yoo, J; Yoshida, M; Zalipska, J (AMER PHYSICAL SOC, 2006-09-01)
  • Search for coherent charged pion production in neutrino-carbon interactions 

    Hasegawa, M; Aliu, E; Andringa, S; Aoki, S; Argyriades, J; Asakura, K; Ashie, R; Berns, H; Bhang, H; Blondel, A; Borghi, S; Bouchez, J; Burguet-Castell, J; Casper, D; Cavata, C; Cervera, A; Chen, SM; Cho, KO; Choi, JH; Dore, U; Espinal, X; Fechner, M; Fernandez, E; Fukuda, Y; Gomez-Cadenas, J; Gran, R; Hara, T; Hasegawa, T; Hayashi, K; Hayato, Y; Helmer, RL; Hill, J; Hiraide, K; Hosaka, J; Ichikawa, AK; Iinuma, M; Ikeda, A; Inagaki, T; Ishida, T; Ishihara, K; Ishii, T; Ishitsuka, M; Itow, Y; Iwashita, T; Jang, HI; Jeon, EJ; Jeong, IS; Joo, KK; Jover, G; Jung, CK; Kajita, T; Kameda, J; Kaneyuki, K; Kato, I; Kearns, E; Kerr, D; Kim, CO; Khabibullin, M; Khotjantsev, A; Kielczewska, D; Kim, JY; Kim, SB; Kitching, P; Kobayashi, K; Kobayashi, T; Konaka, A; Koshio, Y; Kropp, W; Kubota, J; Kudenko, Y; Kuno, Y; Kutter, T; Learned, J; Likhoded, S; Lim, IT; Loverre, PF; Ludovici, L; Maesaka, H; Mallet, J; Mariani, C; Maruyama, T; Matsuno, S; Matveev, V; Mauger, C; McConnel, K; McGrew, C; Mikheyev, S; Minamino, A; Mine, S; Mineev, O; Mitsuda, C; Miura, M; Moriguchi, Y; Morita, T; Moriyama, S; Nakadaira, T; Nakahata, M; Nakamura, K; Nakano, I; Nakaya, T; Nakayama, S; Namba, T; Nambu, R; Nawang, S; Nishikawa, K; Nitta, K; Nova, F; Novella, P; Obayashi, Y; Okada, A; Okumura, K; Oser, SM; Oyama, Y; Pac, MY; Pierre, F; Rodriguez, A; Saji, C; Sakuda, M; Sanchez, F; Sarrat, A; Sasaki, T; Sato, H; Scholberg, K; Schroeter, R; Sekiguchi, M; Sharkey, E; Shiozawa, M; Shiraishi, K; Sitjes, G; Smy, M; Sobel, H; Stone, J; Sulak, L; Suzuki, A; Suzuki, Y; Takahashi, T; Takenaga, Y; Takeuchi, Y; Taki, K; Takubo, Y; Tamura, N; Tanaka, M; Terri, R; T'Jampens, S; Tornero-Lopez, A; Totsuka, Y; Ueda, S; Vagins, M; Whitehead, L; Walter, CW; Wang, W; Wilkes, RJ; Yamada, S; Yamamoto, S; Yanagisawa, C; Yershov, N; Yokoyama, H; Yokoyama, M; Yoo, J; Yoshida, M; Zalipska, J (AMER PHYSICAL SOC, 2005-12-16)
  • Evidence for muon neutrino oscillation in an accelerator-based experiment 

    Aliu, E; Andringa, S; Aoki, S; Argyriades, J; Asakura, K; Ashie, R; Berns, H; Bhang, H; Blondel, A; Borghi, S; Bouchez, J; Burguet-Castell, J; Casper, D; Cavata, C; Cervera, A; Cho, KO; Choi, JH; Dore, U; Espinal, X; Fechner, M; Fernandez, E; Fukuda, Y; Gomez-Cadenas, J; Gran, R; Hara, T; Hasegawa, M; Hasegawa, T; Hayashi, K; Hayato, Y; Helmer, RL; Hill, J; Hiraide, K; Hosaka, J; Ichikawa, AK; Iinuma, M; Ikeda, A; Inagaki, T; Ishida, T; Ishihara, K; Ishii, T; Ishitsuka, M; Itow, Y; Iwashita, T; Jang, HI; Jeon, EJ; Jeong, IS; Joo, K; Jover, G; Jung, CK; Kajita, T; Kameda, J; Kaneyuki, K; Kato, I; Kearns, E; Kerr, D; Kim, CO; Khabibullin, M; Khotjantsev, A; Kielczewska, D; Kim, JY; Kim, S; Kitching, P; Kobayashi, K; Kobayashi, T; Konaka, A; Koshio, Y; Kropp, W; Kubota, J; Kudenko, Y; Kuno, Y; Kutter, T; Learned, J; Likhoded, S; Lim, IT; Loverre, PF; Ludovici, L; Maesaka, H; Mallet, J; Mariani, C; Maruyama, T; Matsuno, S; Matveev, V; Mauger, C; McConnel, K; McGrew, C; Mikheyev, S; Minamino, A; Mine, S; Mineev, O; Mitsuda, C; Miura, M; Moriguchi, Y; Morita, T; Moriyama, S; Nakadaira, T; Nakahata, M; Nakamura, K; Nakano, I; Nakaya, T; Nakayama, S; Namba, T; Nambu, R; Nawang, S; Nishikawa, K; Nitta, K; Nova, F; Novella, P; Obayashi, Y; Okada, A; Okumura, K; Oser, SM; Oyama, Y; Pac, MY; Pierre, F; Rodriguez, A; Saji, C; Sakuda, M; Sanchez, F; Sarrat, A; Sasaki, T; Scholberg, K; Schroeter, R; Sekiguchi, M; Sharkey, E; Shiozawa, M; Shiraishi, K; Sitjes, G; Smy, M; Sobel, H; Stone, J; Sulak, L; Suzuki, A; Suzuki, Y; Takahashi, T; Takenaga, Y; Takeuchi, Y; Taki, K; Takubo, Y; Tamura, N; Tanaka, M; Terri, R; T'Jampens, S; Tornero-Lopez, A; Totsuka, Y; Ueda, S; Vagins, M; Walter, CW; Wang, W; Wilkes, RJ; Yamada, S; Yamamoto, S; Yanagisawa, C; Yershov, N; Yokoyama, H; Yokoyama, M; Yoo, J; Yoshida, M; Zalipska, J (AMERICAN PHYSICAL SOC, 2005-03-04)
  • Probing electron-argon scattering for liquid-argon based neutrino-oscillation program 

    Pandey, V; Abrams, D; Alsalmi, S; Ankowski, AM; Bane, J; Benhar, O; Dai, H; Day, DB; Higinbotham, DW; Mariani, C; Murphy, M; Nguyen, D
    The electron scattering has been a vital tool to study the properties of the target nucleus for over five decades. Though, the particular interest on $^{40}$Ar nucleus stemmed from the progress in the accelerator-based ...
  • Disordered Supersolids in the Extended Bose-Hubbard Model 

    Lin, Fei; Maier, T.A.; Scarola, V.W. (Nature, 2017-10-06)
    The extended Bose-Hubbard model captures the essential properties of a wide variety of physical systems including ultracold atoms and molecules in optical lattices, Josephson junction arrays, and certain narrow band ...
  • Epitaxial thin films of pyrochlore iridate Bi₂₊ₓIr₂₋ᵧO₇₋δ: structure, defects and transport properties 

    Yang, W.C.; Xie, Y.T.; Zhu, W.K.; Park, K.; Chen, A.P.; Losovyj, Y.; Li, Z.; Liu, H.M.; Starr, M.; Acosta, J.A.; Tao, C.G.; Li, N.; Jia, Q.X.; Heremans, J.J.; Zhang, S.X. (Nature, 2017-08-10)
    While pyrochlore iridate thin films are theoretically predicted to possess a variety of emergent topological properties, experimental verification of these predictions can be obstructed by the challenge in thin film growth. ...
  • Measurement of the Spectral Function of 40Ar through the (e, e'p) reaction 

    Ankowski, A; Beminiwattha, R; Benhar, O; Crabb, DG; Day, DB; Garibaldi, F; Garvey, G; Gaskell, D; Giusti, C; Hansen, O; Higinbotham, DW; Holmes, R; Jen, CM; Jiang, X; Keller, D; Keppel, CE; Lindgren, R; Link, JM; Liyanage, N; Mariani, C; Meucci, A; Mills, GB; Myers, L; Pitt, ML; Rondon, OA; Sakuda, M; Sawatzky, B; Souder, PA; Urciuoli, GM; Wood, S; Zhang, J
    The interpretation of the signals detected by high precision experiments aimed at measuring neutrino oscillations requires an accurate description of the neutrino-nucleus cross sections. One of the key element of the ...
  • Imidazole-containing triblock copolymers with a synergy of ether and imidazolium sites 

    Jangu, Chainika; Wang, Jing-Han Helen; Wang, Dong; Fahs, Gregory B.; Heflin, James R.; Moore, Robert B.; Colby, Ralph H.; Long, Timothy E. (The Royal Society of Chemistry, 2015-03-06)
    Reversible addition-fragmentation chain transfer (RAFT) polymerization enabled the synthesis of well-defined A-BC-A triblock copolymers containing a synergy of pendant ether and imidazolium sites. The soft central BC block ...
  • Upconverting nanocomposites dispersed in urea-containing acrylics 

    Inglefield, David Lott, Jr.; Merritt, Travis Robert; Magill, Brenden Archie; Long, Timothy E.; Khodaparast, Giti A. (The Royal Society of Chemistry, 2015-05-08)
    Lanthanide-doped upconverting nanoparticles (UCNPs) have the ability to convert low energy photons into high energy photons, making this material appealing for a variety of scientific pursuits, from solar energy conversion ...
  • Systematic Reverse Engineering of Network Topologies: A Case Study of Resettable Bistable Cellular Responses 

    Mondal, Debasish; Dougherty, Edward T.; Mukhopadhyay, Abhishek; Carbo, Adria; Yao, Guang; Xing, Jianhua (Public Library of Science, 2014-08-29)
    A focused theme in systems biology is to uncover design principles of biological networks, that is, how specific network structures yield specific systems properties. For this purpose, we have previously developed a reverse ...
  • Intervalenceband and plasmon optical absorption in heavily doped GaAs:C 

    Songprakob, Wantana; Zallen, Richard H.; Tsu, D. V.; Liu, W. K. (American Institute of Physics, 2002-01-01)
    By using direct numerical-solution techniques for the reflectance (R) and transmittance (T) equations of a multilayer structure, we have analyzed infrared R and T measurements on heavily doped p-type GaAs:C films grown by ...
  • Strongly correlated electron ground_state energy approximations for Anderson_like models 

    Mancini, Jay D.; Potter, Charles D.; Bowen, Samuel P. (American Institute of Physics, 1987-04-15)
    We report preliminary results of convergence properties for nonperturbative resolvent approximations to Anderson_like models of magnetic ions in metals. Our study is initially focused on the spin_ 1/2 Anderson model for ...
  • Variational ground state for the periodic Anderson model 

    Bowen, Samuel P.; Mancini, Jay D. (American Institute of Physics, 1988-04-15)
    A variational calculation of the ground state of the Anderson lattice model is discussed. The calculation creates a finite Hamiltonian matrix for many_electron states, which are appropriate for the thermodynamic limit. A ...
  • The role of coulomb interactions in valence transition: Falicov_Kimball model 

    Bowen, Samuel P.; Lady, S. C. (American Institute of Physics, 1984)
    A nonperturbative method of Green function calculation is applied to the Falicov_Kimball model Hamiltonian. In an approximation to first order in the hopping matrix elements, self_consistent solutions for several thermal ...

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