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XcisClique: analysis of regulatory bicliques
Background Modeling of cis-elements or regulatory motifs in promoter (upstream) regions of genes is a challenging computational problem. In this work, set of regulatory motifs simultaneously present in the promoters of a ...
A General Probabilistic Model of the PCR Process
(Department of Computer Science, Virginia Polytechnic Institute & State University, 2004), TR-04-06
This paper rigorously derives a general probabilistic model for the PCR process; this model includes as a special case the Velikanov-Kapral model where all nucleotide reaction rates are the same. In this model the probability ...