Browsing by Author "Gooseff, Michael N."
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- Connectivity: insights from the US Long Term Ecological Research NetworkIwaniec, David M.; Gooseff, Michael N.; Suding, Katharine N.; Samuel Johnson, David; Reed, Daniel C.; Peters, Debra P. C.; Adams, Byron J.; Barrett, John E.; Bestelmeyer, Brandon T.; Castorani, Max C. N.; Cook, Elizabeth M.; Davidson, Melissa J.; Groffman, Peter M.; Hanan, Niall P.; Huenneke, Laura F.; Johnson, Pieter T. J.; McKnight, Diane M.; Miller, Robert J.; Okin, Gregory S.; Preston, Daniel L.; Rassweiler, Andrew; Ray, Chris; Sala, Osvaldo E.; Schooley, Robert L.; Seastedt, Timothy; Spasojevic, Marko J.; Vivoni, Enrique R. (2021-05)Ecosystems across the United States are changing in complex and surprising ways. Ongoing demand for critical ecosystem services requires an understanding of the populations and communities in these ecosystems in the future. This paper represents a synthesis effort of the U.S. National Science Foundation-funded Long-Term Ecological Research (LTER) network addressing the core research area of "populations and communities." The objective of this effort was to show the importance of long-term data collection and experiments for addressing the hardest questions in scientific ecology that have significant implications for environmental policy and management. Each LTER site developed at least one compelling case study about what their site could look like in 50-100 yr as human and environmental drivers influencing specific ecosystems change. As the case studies were prepared, five themes emerged, and the studies were grouped into papers in this LTER Futures Special Feature addressing state change, connectivity, resilience, time lags, and cascading effects. This paper addresses the "connectivity" theme and has examples from the Phoenix (urban), Niwot Ridge (alpine tundra), McMurdo Dry Valleys (polar desert), Plum Island (coastal), Santa Barbara Coastal (coastal), and Jornada (arid grassland and shrubland) sites. Connectivity has multiple dimensions, ranging from multi-scalar interactions in space to complex interactions over time that govern the transport of materials and the distribution and movement of organisms. The case studies presented here range widely, showing how land-use legacies interact with climate to alter the structure and function of arid ecosystems and flows of resources and organisms in Antarctic polar desert, alpine, urban, and coastal marine ecosystems. Long-term ecological research demonstrates that connectivity can, in some circumstances, sustain valuable ecosystem functions, such as the persistence of foundation species and their associated biodiversity or, it can be an agent of state change, as when it increases wind and water erosion. Increased connectivity due to warming can also lead to species range expansions or contractions and the introduction of undesirable species. Continued long-term studies are essential for addressing the complexities of connectivity. The diversity of ecosystems within the LTER network is a strong platform for these studies.
- The Distribution of Surface Soil Moisture over Space and Time in Eastern Taylor Valley, AntarcticaSalvatore, Mark R.; Barrett, John E.; Fackrell, Laura E.; Sokol, Eric R.; Levy, Joseph S.; Kuentz, Lily C.; Gooseff, Michael N.; Adams, Byron J.; Power, Sarah N.; Knightly, J. Paul; Matul, Haley M.; Szutu, Brian; Doran, Peter T. (MDPI, 2023-06-18)Available soil moisture is thought to be the limiting factor for most ecosystem processes in the cold polar desert of the McMurdo Dry Valleys (MDVs) of Antarctica. Previous studies have shown that microfauna throughout the MDVs are capable of biological activity when sufficient soil moisture is available (~2–10% gravimetric water content), but few studies have attempted to quantify the distribution, abundance, and frequency of soil moisture on scales beyond that of traditional field work or local field investigations. In this study, we present our work to quantify the soil moisture content of soils throughout the Fryxell basin using multispectral satellite remote sensing techniques. Our efforts demonstrate that ecologically relevant abundances of liquid water are common across the landscape throughout the austral summer. On average, the Fryxell basin of Taylor Valley is modeled as containing 1.5 ± 0.5% gravimetric water content (GWC) across its non-fluvial landscape with ~23% of the landscape experiencing an average GWC > 2% throughout the study period, which is the observed limit of soil nematode activity. These results indicate that liquid water in the soils of the MDVs may be more abundant than previously thought, and that the distribution and availability of liquid water is dependent on both soil properties and the distribution of water sources. These results can also help to identify ecological hotspots in the harsh polar Antarctic environment and serve as a baseline for detecting future changes in the soil hydrological regime.
- Environmental controls over bacterial communities in polar desert soilsGeyer, Kevin M.; Altrichter, Adam E.; Van Horn, David J.; Takacs-Vesbach, Cristina D.; Gooseff, Michael N.; Barrett, John E. (Ecological Society of America, 2013-10)Productivity-diversity theory has proven informative to many investigations seeking to understand drivers of spatial patterns in biotic communities and relationships between resource availability and community structure documented for a wide variety of taxa. For soil bacteria, availability of organic matter is one such resource known to influence diversity and community structure. Here we describe the influence of environmental gradients on soil bacterial communities of the McMurdo Dry Valleys, Antarctica, a model ecosystem that hosts simple, microbially-dominated foodwebs believed to be primarily structured by abiotic drivers such as water, organic matter, pH, and electrical conductivity. We sampled 48 locations exhibiting orders of magnitude ranges in primary production and soil geochemistry (pH and electrical conductivity) over local and regional scales. Our findings show that environmental gradients imposed by cryptogam productivity and regional variation in geochemistry influence the diversity and structure of soil bacterial communities. Responses of soil bacterial richness to carbon content illustrate a productivity-diversity relationship, while bacterial community structure primarily responds to soil pH and electrical conductivity. This diversity response to resource availability and a community structure response to environmental severity suggests a need for careful consideration of how microbial communities and associated functions may respond to shifting environmental conditions resulting from human activity and climate variability.
- Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic ScaleVan Horn, David J.; Van Horn, M. Lee; Barrett, John E.; Gooseff, Michael N.; Altrichter, Adam E.; Geyer, Kevin M.; Zeglin, Lydia H.; Takacs-Vesbach, Cristina D. (PLOS, 2013-06-18)Understanding controls over the distribution of soil bacteria is a fundamental step toward describing soil ecosystems, understanding their functional capabilities, and predicting their responses to environmental change. This study investigated the controls on the biomass, species richness, and community structure and composition of soil bacterial communities in the McMurdo Dry Valleys, Antarctica, at local and regional scales. The goals of the study were to describe the relationships between abiotic characteristics and soil bacteria in this unique, microbially dominated environment, and to test the scale dependence of these relationships in a low complexity ecosystem. Samples were collected from dry mineral soils associated with snow patches, which are a significant source of water in this desert environment, at six sites located in the major basins of the Taylor and Wright Valleys. Samples were analyzed for a suite of characteristics including soil moisture, pH, electrical conductivity, soil organic matter, major nutrients and ions, microbial biomass, 16 S rRNA gene richness, and bacterial community structure and composition. Snow patches created local biogeochemical gradients while inter-basin comparisons encompassed landscape scale gradients enabling comparisons of microbial controls at two distinct spatial scales. At the organic carbon rich, mesic, low elevation sites Acidobacteria and Actinobacteria were prevalent, while Firmicutes and Proteobacteria were dominant at the high elevation, low moisture and biomass sites. Microbial parameters were significantly related with soil water content and edaphic characteristics including soil pH, organic matter, and sulfate. However, the magnitude and even the direction of these relationships varied across basins and the application of mixed effects models revealed evidence of significant contextual effects at local and regional scales. The results highlight the importance of the geographic scale of sampling when determining the controls on soil microbial community characteristics.
- It takes a community to raise a hydrologist: the Modular Curriculum for Hydrologic Advancement (MOCHA)Wagener, T.; Kelleher, C.; Weiler, M.; McGlynn, B.; Gooseff, Michael N.; Marshall, L.; Meixner, T.; McGuire, Kevin J.; Gregg, S.; Sharma, P.; Zappe, S. (Copernicus, 2012-01-01)Protection from hydrological extremes and the sustainable supply of hydrological services in the presence of changing climate and lifestyles as well as rocketing population pressure in many parts of the world are the defining societal challenges for hydrology in the 21st century. A review of the existing literature shows that these challenges and their educational consequences for hydrology were foreseeable and were even predicted by some. However, surveys of the current educational basis for hydrology also clearly demonstrate that hydrology education is not yet ready to prepare students to deal with these challenges. We present our own vision of the necessary evolution of hydrology education, which we implemented in the Modular Curriculum for Hydrologic Advancement (MOCHA). The MOCHA project is directly aimed at developing a community-driven basis for hydrology education. In this paper we combine literature review, community survey, discussion and assessment to provide a holistic baseline for the future of hydrology education. The ultimate objective of our educational initiative is to enable educators to train a new generation of "renaissance hydrologists," who can master the holistic nature of our field and of the problems we encounter.
- Landscape history and contemporary environmental drivers of microbial community structure and functionAltrichter, Adam E. (Virginia Tech, 2010-04-10)Recent work in microbial ecology has focused on elucidating controls over biogeographic patterns and connecting microbial community composition to ecosystem function. My objective was to investigate the relative influences of landscape legacies and contemporary environmental factors on the distribution of soil microbial communities and their contribution to ecosystem processes across a glacial till sequence in Taylor Valley, Antarctica. Within each till unit, I sampled from dry areas and areas with visible evidence of recent surface water movement generated by seasonal melting of ephemeral snow packs and hillslope ground ice. Using T-RFLP 16S rRNA gene profiles of microbial communities, I analyzed the contribution of till and environmental factors to community similarity, and assessed the functional potential of the microbial community using extracellular enzyme activity assays. Microbial communities were influenced by geochemical differences among both tills and local environments, but especially organized by variables associated with water availability as the first axis of an NMDS ordination was strongly related to shifts in soil moisture content. CCA revealed that tills explained only 3.4% of the variability in community similarity among sites, while geochemical variables explained 18.5%. Extracellular enzyme activity was correlated with relevant geochemical variables reflecting the influence of nutrient limitation on microbial activity. In addition, enzyme activity was related to changes in community similarity, particularly in wet environments with a partial Mantel correlation of 0.32. These results demonstrate how landscape history and environmental conditions can shape the functional potential of a microbial community mediated through shifts in microbial community composition.
- Microbial Community Responses to Increased Water and Organic Matter in the Arid Soils of the McMurdo Dry Valleys, AntarcticaBuelow, Heather N.; Winter, Ara S.; Van Horn, David J.; Barrett, John E.; Gooseff, Michael N.; Schwartz, Egbert; Takacs-Vesbach, Cristina D. (Frontiers, 2016-07-18)The soils of the McMurdo Dry Valleys, Antarctica are an extreme polar desert, inhabited exclusively by microscopic taxa. This region is on the threshold of anticipated climate change, with glacial melt, permafrost thaw, and the melting of massive buried ice increasing liquid water availability and mobilizing soil nutrients. Experimental water and organic matter (OM) amendments were applied to investigate how these climate change effects may impact the soil communities. To identify active taxa and their functions, total community RNA transcripts were sequenced and annotated, and amended soils were compared with unamended control soils using differential abundance and expression analyses. Overall, taxonomic diversity declined with amendments of water and OM. The domain Bacteria increased with both amendments while Eukaryota declined from 38% of all taxa in control soils to 8 and 11% in water and OM amended soils, respectively. Among bacterial phyla, Actinobacteria (59%) dominated water-amended soils and Firmicutes (45%) dominated OM amended soils. Three bacterial phyla (Actinobacteria, Proteobacteria, and Firmicutes) were primarily responsible for the observed positive functional responses, while eukaryotic taxa experienced the majority (27 of 34) of significant transcript losses. These results indicated that as climate changes in this region, a replacement of endemic taxa adapted to dry, oligotrophic conditions by generalist, copiotrophic taxa is likely.
- Primary productivity as a control over soil microbial diversity along environmental gradients in a polar desert ecosystemGeyer, Kevin M.; Takacs-Vesbach, Cristina D.; Gooseff, Michael N.; Barrett, John E. (PeerJ, 2017-07-25)Primary production is the fundamental source of energy to foodwebs and ecosystems, and is thus an important constraint on soil communities. This coupling is particularly evident in polar terrestrial ecosystems where biological diversity and activity is tightly constrained by edaphic gradients of productivity (e.g., soil moisture, organic carbon availability) and geochemical severity (e.g., pH, electrical conductivity). In the McMurdo Dry Valleys of Antarctica, environmental gradients determine numerous properties of soil communities and yet relatively few estimates of gross or net primary productivity (GPP, NPP) exist for this region. Here we describe a survey utilizing pulse amplitude modulation (PAM) fluorometry to estimate rates of GPP across a broad environmental gradient along with belowground microbial diversity and decomposition. PAM estimates of GPP ranged from an average of 0.27 μmol O2/m2/s in the most arid soils to an average of 6.97 μmol O2/m2/s in the most productive soils, the latter equivalent to 217 g C/m2/y in annual NPP assuming a 60 day growing season. A diversity index of four carbon-acquiring enzyme activities also increased with soil productivity, suggesting that the diversity of organic substrates in mesic environments may be an additional driver of microbial diversity. Overall, soil productivity was a stronger predictor of microbial diversity and enzymatic activity than any estimate of geochemical severity. These results highlight the fundamental role of environmental gradients to control community diversity and the dynamics of ecosystem-scale carbon pools in arid systems.
- Seasonal controls on snow distribution and aerial ablation at the snow-patch and landscape scales, McMurdo Dry Valleys, AntarcticaEveland, J. W.; Gooseff, Michael N.; Lampkin, D. J.; Barrett, John E.; Takacs-Vesbach, Cristina D. (Copernicus Publications, 2013)Accumulated snow in the McMurdo Dry Valleys, while limited, has great ecological significance to subnivian soil environments. Though sublimation dominates the ablation process in this region, measurable increases in soil moisture and insulation from temperature extremes provide more favorable conditions with respect to subnivian soil communities. While precipitation is not substantial, significant amounts of snow can accumulate, via wind transport, in topographic lees along the valley bottoms, forming thousands of discontinuous snow patches. These patches have the potential to act as significant sources of local meltwater, controlling biogeochemical cycling and the landscape distribution of microbial communities. Therefore, determining the spatial and temporal dynamics of snow at multiple scales is imperative to understanding the broader ecological role of snow in this region. High-resolution satellite imagery acquired during the 2009-2010 and 2010-2011 austral summers was used to quantify the distribution of snow across Taylor and Wright valleys. Extracted snow-covered area from the imagery was used as the basis for assessing inter-annual variability and seasonal controls on accumulation and ablation of snow at multiple scales. In addition to landscape analyses, fifteen 1 km(2) plots (3 in each of 5 study regions) were selected to assess the prevalence of snow cover at finer spatial scales, referred to herein as the snow-patch scale. Results confirm that snow patches tend to form in the same locations each year with some minor deviations observed. At the snow-patch scale, neighboring patches often exhibit considerable differences in aerial ablation rates, and particular snow patches do not reflect trends for snow-covered area observed at the landscape scale. These differences are presumably related to microtopographic influences acting on individual snow patches, such as wind sheltering and differences in snow depth due to the underlying topography. This highlights the importance of both the landscape and snow-patch scales in assessing the effects of snow cover on biogeochemical cycling and microbial communities.
- Spatial variation in soil active-layer geochemistry across hydrologic margins in polar desert ecosystemsBarrett, John E.; Gooseff, Michael N.; Takacs-Vesbach, Cristina D. (Copernicus Publications, 2009)Polar deserts are characterized by severe spatial-temporal limitations of liquid water. In soil active layers of the Antarctic Dry Valleys, liquid water is infrequently available over most of the arid terrestrial landscape. However, soils on the margins of glacial melt-water streams and lakes are visibly wet during the brief Austral summer when temperatures permit the existence of liquid water. We examined the role of these hydrologic margins as preferential zones for the transformation and transport of nutrient elements and solutes in an environment where geochemical weathering and biological activity is strictly limited by the dearth of liquid water. We report on hydropedological investigations of aquatic-terrestrial transition zones adjacent to 11 stream and lake systems in the Antarctic Dry Valleys. Our results show that wetted zones extended 1-11 m from the edges of lotic and lentic systems. While capillary demand and surface evaporation drive a one-way flux of water through these zones, the scale of these transition zones is determined by the topography and physical characteristics of the surrounding soils. Nutrient concentrations and fluxes appear to be influenced by both the hydrology and microbial-mediated biogeochemical processes. Salt concentrations are enriched near the distal boundary of the wetted fronts due to evapo-concentration of pore water in lake margin soils, while organic matter, ammonium and phosphate concentrations are highest in stream channel sediments where potential for biological activity is greatest. Thus, in the Antarctic Dry Valleys, intermittently wet soils on the margins of streams and lakes are important zones of both geochemical cycling and biological activity.