Assembly and dynamics of the apple carposphere microbiome during fruit development and storage

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dc.contributor.authorZhimo, V. Yekaen
dc.contributor.authorKumar, Ajayen
dc.contributor.authorBiasi, Antonioen
dc.contributor.authorAbdelfattah, Ahmeden
dc.contributor.authorSharma, Vijay Kumaren
dc.contributor.authorSalim, Shoshanaen
dc.contributor.authorFeygenberg, Olegen
dc.contributor.authorBartuv, Rotemen
dc.contributor.authorFreilich, Shirien
dc.contributor.authorWhitehead, Susan R.en
dc.contributor.authorWisniewski, Michaelen
dc.contributor.authorDroby, Samiren
dc.date.accessioned2022-10-18T19:33:41Zen
dc.date.available2022-10-18T19:33:41Zen
dc.date.issued2022-08-09en
dc.description.abstractMicrobial communities associated with fruit can contribute to quality and pathogen resistance, but little is known about their assembly and dynamics during fruit development and storage. Three apple cultivars growing under the same environmental conditions were utilized to examine the apple carposphere microbiome composition and structure at different developmental stages and storage. There was a significant effect (Adonis, p <= 0.001) of fruit genotype and its developmental stages and storage times on the fruit surface microbial assemblage and a strong temporal microbial community succession was detected (Mantel test: R <= 0.5, p = 0.001) in both bacterial and fungal communities. A set of 15 bacterial and 35 fungal core successional taxa and members exhibiting differential abundances at different fruit stages were identified. For the first time, we show the existence of underlying universal dynamics in the assembly of fruit-associated microbiomes. We also provide evidence of strong microbial cross-domain associations and uncover potential microbe-microbe correlations in the apple carposphere. Together our findings shed light on how the fruit carposphere assemble and change over time, and provide new insights into fruit microbial ecology.en
dc.description.notesThis research was supported by U.S. - Israel Binational Agricultural Research and Development Fund (BARD) IS-5455-21. Additional support was provided by Agriculture and Food Research Initiative Competitive Grant no. 2018-07366 from the USDA National Institute of Food and Agriculture to SW.en
dc.description.sponsorshipU.S. - Israel Binational Agricultural Research and Development Fund (BARD) [IS-5455-21]; USDA National Institute of Food and Agriculture [2018-07366]en
dc.description.versionPublished versionen
dc.format.mimetypeapplication/pdfen
dc.identifier.doihttps://doi.org/10.3389/fmicb.2022.928888en
dc.identifier.eissn1664-302Xen
dc.identifier.other928888en
dc.identifier.pmid36016781en
dc.identifier.urihttp://hdl.handle.net/10919/112194en
dc.identifier.volume13en
dc.language.isoenen
dc.publisherFrontiersen
dc.rightsCreative Commons Attribution 4.0 Internationalen
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/en
dc.subjectappleen
dc.subjectassemblyen
dc.subjectdynamicsen
dc.subjectmicrobiomeen
dc.subjectsuccessionen
dc.titleAssembly and dynamics of the apple carposphere microbiome during fruit development and storageen
dc.title.serialFrontiers in Microbiologyen
dc.typeArticle - Refereeden
dc.type.dcmitypeTexten

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