Stabilizing gene regulatory networks through feedforward loops

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Date

2013-06

Journal Title

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Volume Title

Publisher

American Institute of Physics

Abstract

The global dynamics of gene regulatory networks are known to show robustness to perturbations in the form of intrinsic and extrinsic noise, as well as mutations of individual genes. One molecular mechanism underlying this robustness has been identified as the action of so-called microRNAs that operate via feedforward loops. We present results of a computational study, using the modeling framework of stochastic Boolean networks, which explores the role that such network motifs play in stabilizing global dynamics. The paper introduces a new measure for the stability of stochastic networks. The results show that certain types of feedforward loops do indeed buffer the network against stochastic effects.

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Keywords

Animal micrornas, Expression, Canalization, Robustness, Evolution, Cancer, Motifs, Cells

Citation

Kadelka, C. and Murrugarra, D. and Laubenbacher, R., “Stabilizing gene regulatory networks through feedforward loops,” Chaos 23, 025107 (2013), DOI:http://dx.doi.org/10.1063/1.4808248