Advances in Survival Analysis: Accurate Partial Likelihood Computation by Poisson-Binomial Distributions and Nonparametric Competing Risk Cox Model
| dc.contributor.author | Cho, Youngjin | en |
| dc.contributor.committeechair | Du, Pang | en |
| dc.contributor.committeechair | Hong, Yili | en |
| dc.contributor.committeemember | Kim, Inyoung | en |
| dc.contributor.committeemember | Zhu, Hongxiao | en |
| dc.contributor.department | Statistics | en |
| dc.date.accessioned | 2025-09-20T08:00:51Z | en |
| dc.date.available | 2025-09-20T08:00:51Z | en |
| dc.date.issued | 2025-09-19 | en |
| dc.description.abstract | Two novel contributions to survival analysis are presented. The first project revisits the partial likelihood in the Cox model, which traditionally approximates conditional probabilities using risk score ratios under a continuous-time assumption. We propose a new accurate partial likelihood computation method based on the Poisson-binomial distribution. Although ties are common in real studies, existing Cox model theory largely overlooks tied data. In contrast, our approach accommodates both grouped data with ties and continuous data without ties, offering a unified theoretical framework for accurate partial likelihood computation regardless of data type. Simulations and real data analyses show that the method reduces bias and mean squared error while improving confidence interval coverage rates, particularly when ties are frequent or risk score variability is high. The second project develops a nonparametric regression model for competing risks survival data by combining the proportional cause-specific hazards framework with a smoothing spline ANOVA approach. We establish estimation procedures and theoretical convergence rates. Simulation studies demonstrate the method's effectiveness, and application to a multiple myeloma dataset reveals that for each gene expression covariate, at least one cause-specific effect is nonlinear and differs from the others. The proposed model fills a gap in the existing literature, where competing risks are often overlooked or covariate effects are assumed to follow parametric forms, by providing a flexible and practical framework for data analysis. | en |
| dc.description.abstractgeneral | Two new methodological developments in survival analysis are introduced. For the first project, the Cox model is a widely used tool for analyzing the relationship between event times and covariates, which uses partial likelihood to estimate regression coefficients. Because the original partial likelihood is computationally complex, approximations are often used in practice. We revisit the original formulation and develop a more accurate computation method by leveraging fast techniques for the Poisson binomial distribution, which underlies the partial likelihood structure. Unlike existing theory, which typically excludes ties (simultaneous events), our method accommodates them and also applies to data without ties, providing a unified framework. Simulation studies and real data applications demonstrate the improved performance of our approach, especially in settings with many ties. The second project develops a flexible regression model for competing risks, where individuals may experience one of several types of events, such as death from different causes. By combining the proportional cause-specific hazards framework with a smoothing spline ANOVA approach, for each risk factor, we enable the estimation of various nonlinear effects of covariates in a nonparametric manner. Simulation studies confirm the method's accuracy, and application to a multiple myeloma dataset reveals that for each gene expression covariate, at least one cause-specific effect is nonlinear and distinct. | en |
| dc.description.degree | Doctor of Philosophy | en |
| dc.format.medium | ETD | en |
| dc.identifier.other | vt_gsexam:44551 | en |
| dc.identifier.uri | https://hdl.handle.net/10919/137809 | en |
| dc.language.iso | en | en |
| dc.publisher | Virginia Tech | en |
| dc.rights | In Copyright | en |
| dc.rights.uri | http://rightsstatements.org/vocab/InC/1.0/ | en |
| dc.subject | Cox Model | en |
| dc.subject | Breslow Estimator | en |
| dc.subject | Efron Estimator | en |
| dc.subject | Competing Risk | en |
| dc.subject | Cause-Specific Hazard | en |
| dc.subject | Smoothing Spline ANOVA | en |
| dc.title | Advances in Survival Analysis: Accurate Partial Likelihood Computation by Poisson-Binomial Distributions and Nonparametric Competing Risk Cox Model | en |
| dc.type | Dissertation | en |
| thesis.degree.discipline | Statistics | en |
| thesis.degree.grantor | Virginia Polytechnic Institute and State University | en |
| thesis.degree.level | doctoral | en |
| thesis.degree.name | Doctor of Philosophy | en |