Cells, circuits, and development of the mouse lateral geniculate nucleus

dc.contributor.authorStebbins, Katelynen
dc.contributor.committeechairFox, Michael A.en
dc.contributor.committeememberOlsen, Michelle Lynneen
dc.contributor.committeememberPan, Yuchin Alberten
dc.contributor.committeememberLaConte, Leslie E. W.en
dc.contributor.committeememberFarris, Shannon Lynnen
dc.contributor.departmentGraduate Schoolen
dc.date.accessioned2025-06-14T08:02:21Zen
dc.date.available2025-06-14T08:02:21Zen
dc.date.issued2025-06-13en
dc.description.abstractIn the visual system, retinal axons transmit visual information from external stimuli to numerous and distinct brain regions. In rodents, one major area that is densely innervated by retinal input is the visual thalamus. The mouse visual thalamus serves as a powerful model system to understand sensory circuit development based on its orderly structure and ease of accessibility for experimental manipulation. Within the visual thalamus, the lateral geniculate nucleus (LGN) is divided into three distinct regions: ventral LGN (vLGN), dorsal LGN (dLGN), and the intergeniculate leaflet (IGL). Previous studies have characterized the cytoarchitecture and circuitry of dLGN, which is crucial for classical image-forming vision. However, the molecular resolution of subtypes and the connection between subtypes of retinal ganglion cells with those cell types in dLGN remains unresolved. vLGN is known to be associated with non-image-forming vision, though its complete neurochemistry, cytoarchitecture, and afferent and efferent circuitry remain unresolved, raising fundamental questions about its functional role within the visual system. Identifying the structure and function of neural circuits related to vision is crucial for understanding how light exerts its influence on programming an individual's circadian cycle, mood disorders, fear perception, and perception and interaction with the environment. We employed state-of-the-art single-nucleus sequencing to identify a comprehensive list of cells in both dLGN and vLGN. Using this knowledge, we next explored the development of cell-type specific layers in the vLGN. In situ hybridization, immunohistochemistry, and genetic reporter lines revealed that the subtype-specific layering of retinorecipient cells in vLGNe is established during embryonic development. Taken together, the studies in this dissertation have not only identified novel subtypes of dLGN and vLGN cells but also point to new means of organizing visual information into parallel pathways by anatomically creating distinct sensory channels. This subtype-specific organization may be key to understanding how LGN receives, processes, and transmits light-derived signals in the visual system. Elucidating these pathways gives potentially generalizable principles in how sensory information is organized in the brain.en
dc.description.abstractgeneralThis project focuses on the development of cells and circuits within the mouse visual system, with the long-term goal of gaining a better understanding of how we might regenerate these circuits in diseases or trauma that result in vision loss. Our lab has shown that disruption of these circuits in the visual system is associated with diseases such as glaucoma, which impacts millions of Americans and results in a significant economic, social, and emotional burden on our society. Here, we used powerful new tools to study individual cells in two important parts of the brain involved in vision. This helped us create a detailed list of the different kinds of cells in each area. With that information, we looked at how these cells are organized into layers in one of those brain regions. Our experiments showed that the way these cells are arranged—especially the ones that receive signals from the eyes—is already set before birth. Overall, this research found new types of brain cells and suggests that the brain may sort visual information into separate channels by physically organizing it into layers. By studying the underlying mechanism of these diseases, we hope to contribute to the development of therapeutic interventions, ultimately helping relieve some of this enormous burden.en
dc.description.degreeDoctor of Philosophyen
dc.format.mediumETDen
dc.identifier.othervt_gsexam:43644en
dc.identifier.urihttps://hdl.handle.net/10919/135523en
dc.language.isoenen
dc.publisherVirginia Techen
dc.rightsIn Copyrighten
dc.rights.urihttp://rightsstatements.org/vocab/InC/1.0/en
dc.subjectthalamusen
dc.subjectsubcortical visual systemen
dc.subjectsingle-cell transcriptomicsen
dc.subjectlateral geniculate nucleusen
dc.subjectGABAergic neuronen
dc.subjectretinal ganglion cellen
dc.titleCells, circuits, and development of the mouse lateral geniculate nucleusen
dc.typeDissertationen
thesis.degree.disciplineTranslational Biology, Medicine and Healthen
thesis.degree.grantorVirginia Polytechnic Institute and State Universityen
thesis.degree.leveldoctoralen
thesis.degree.nameDoctor of Philosophyen

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