Phenotypic and Genomic Local Adaptation across Latitude and Altitude in Populus trichocarpa

dc.contributor.authorZhang, Manen
dc.contributor.authorSuren, Haktanen
dc.contributor.authorHolliday, Jason A.en
dc.contributor.departmentForest Resources and Environmental Conservationen
dc.date.accessioned2019-12-19T17:37:49Zen
dc.date.available2019-12-19T17:37:49Zen
dc.date.issued2019-07-10en
dc.description.abstractLocal adaptation to climate allows plants to cope with temporally and spatially heterogeneous environments, and parallel phenotypic clines provide a natural experiment to uncover the genomic architecture of adaptation. Though extensive effort has been made to investigate the genomic basis of local adaptation to climate across the latitudinal range of tree species, less is known for altitudinal clines. We used exome capture to genotype 451 Populus trichocarpa genotypes across altitudinal and latitudinal gradients spanning the natural species range, and phenotyped these trees for a variety of adaptive traits in two common gardens. We observed clinal variation in phenotypic traits across the two transects,which indicates climate-driven selection, and coupled gene-based genotype–phenotype and genotype–environment association scans to identify imprints of climatic adaptation on the genome. Although many of the phenotype-and climate-associated genes were unique to one transect, we found evidence of parallelism between latitude and altitude, as well as significant convergence when we compared our outlier genes with those putatively involved in climatic adaptation in two gymnosperm species. These results suggest that not only genomic constraint during adaptation to similar environmental gradients in poplar but also different environmental contexts, spatial scale, and perhaps redundant function among potentially adaptive genes and polymorphisms lead to divergent adaptive architectures.en
dc.format.extent17 pagesen
dc.format.mimetypeapplication/pdfen
dc.identifier.doihttps://doi.org/10.1093/gbe/evz151en
dc.identifier.issue8en
dc.identifier.urihttp://hdl.handle.net/10919/96035en
dc.identifier.volume11en
dc.language.isoenen
dc.publisherOxford University Pressen
dc.rightsCreative Commons Attribution 4.0 Internationalen
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/en
dc.subjectlocal adaptationen
dc.subjectparallel evolutionen
dc.subjectpopulation genomicsen
dc.subjectforest geneticsen
dc.titlePhenotypic and Genomic Local Adaptation across Latitude and Altitude in Populus trichocarpaen
dc.title.serialGenome Biology and Evolutionen
dc.typeArticle - Refereeden
dc.type.dcmitypeTexten
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