Recovery of Antibiotic Resistance Genes From Agricultural Runoff
| dc.contributor.author | Jacobs, Kyle Bowers | en |
| dc.contributor.committeechair | Krometis, Leigh-Anne H. | en |
| dc.contributor.committeechair | Hession, W. Cully | en |
| dc.contributor.committeemember | Pruden, Amy | en |
| dc.contributor.department | Biological Systems Engineering | en |
| dc.date.accessioned | 2019-03-28T06:00:44Z | en |
| dc.date.available | 2019-03-28T06:00:44Z | en |
| dc.date.issued | 2017-10-03 | en |
| dc.description.abstract | The reduced capacity of antibiotics to treat infections is one of the greatest health concerns that society faces. There is substantial evidence that links this reduced capacity with the widespread use of antibiotics in livestock production. Livestock can act as reservoirs of antibiotic resistance genes (ARGs) and antibiotic resistant bacteria, which can pass resistance on in the livestock's manure. It is important to understand the fate of antibiotic resistance genes and resistant bacteria in the environment after land-application of manure-based amendments. The goal of this field-scale study was to identify the effects of soil amendments (inorganic fertilizer, compost, or raw manure) and crop cover (lettuce or radish) on sediment transfer, fecal indicator bacteria (FIB), and release of ARGs in runoff over six storm events. Two FIB (Escherichia coli and enterococci) and two ARGs (sulI and ermB) were quantified in runoff from each of the constructed plots throughout the growing season. FIB and ARGs were recovered from all plots, including control plots indicating a background level within the soil. Additionally, only the effects of variability among individual storms had an impact on the concentration of FIB in runoff. Vegetative cover and storm variability affected sediment release. A trend of higher sul1 and ermB in runoff from compost and raw manure-amended plots for at least 2 months after planting crops was observed. Only one of these ARGs (ermB) is associated with the class of drugs given to the dairy cows used for the manure and compost, indicating inherent carriage of some ARGs independent of the type of antibiotic administered, and such genes can persist in the environment. These results suggest that there is a risk of ARGs being carried into areas downgradient from agricultural plots that have been amended with compost or manure. | en |
| dc.description.abstractgeneral | Millions of kilograms of antibiotics are used in livestock production each year in the United States, causing concern that such widespread antibiotic use could be contributing to a decrease in effectiveness of antibiotics for treating illness in humans. The purpose of this study is to understand how antibiotic resistance might be transferred from livestock to manure into the environment and ultimately to people. This field-scale study tested the effect of soil amendment (chemical fertilizer, compost, or manure) and crop cover (lettuce or radish) on the release of fecal indicator bacteria (Escherichia coli and enterococci), sediment, and antibiotic resistance genes (sul1 and ermB) in runoff coming from agricultural plots. In part, this study helped evaluate recent US Food and Drug Administration, Food Safety Modernization Act (FSMA) criteria for composting to reduce pathogenic bacteria when using manure-derived soil amendment to grow food for human consumption. This study found that fecal indicator bacteria and antibiotic resistance genes were recovered in runoff from all soil amendment and vegetable types. However, there were higher levels of antibiotic resistance genes recovered in runoff from compost and manure amended soils than from fertilizer control or unamended plots during the growing season. This suggests that composting may not be effective for reducing or removing the genes that encode antibiotic resistance in runoff. | en |
| dc.description.degree | MS | en |
| dc.format.medium | ETD | en |
| dc.identifier.other | vt_gsexam:13034 | en |
| dc.identifier.uri | http://hdl.handle.net/10919/88743 | en |
| dc.publisher | Virginia Tech | en |
| dc.rights | In Copyright | en |
| dc.rights.uri | http://rightsstatements.org/vocab/InC/1.0/ | en |
| dc.subject | antibiotic resistance | en |
| dc.subject | stormwater | en |
| dc.subject | qPCR | en |
| dc.subject | sediment | en |
| dc.subject | fecal indicator bacteria | en |
| dc.subject | runoff | en |
| dc.title | Recovery of Antibiotic Resistance Genes From Agricultural Runoff | en |
| dc.type | Thesis | en |
| thesis.degree.discipline | Biological Systems Engineering | en |
| thesis.degree.grantor | Virginia Polytechnic Institute and State University | en |
| thesis.degree.level | masters | en |
| thesis.degree.name | MS | en |
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