Acoustic Assembly of Collagen Hydrogels in Petri Dishes: The Distinct Roles of Traveling and Standing Waves

dc.contributor.authorDu, Yingshanen
dc.contributor.committeechairTian, Zhenhuaen
dc.contributor.committeememberHan, Aiguoen
dc.contributor.committeememberSun, Wujinen
dc.contributor.departmentBiomedical Engineeringen
dc.date.accessioned2026-05-19T19:05:48Zen
dc.date.available2026-05-19T19:05:48Zen
dc.date.issued2026-04-22en
dc.description.abstractAnisotropic biomaterials containing oriented collagen fibers are critical for mimicking the native extracellular matrix (ECM) architectures, showing great potential for various biomedical research areas, such as wound dressing, corneal grafting, and the study of cancer cell invasion in biomimetic microenvironments. While previous studies have utilized electric, microfluidic, magnetic, and mechanical methods to align collagen fibers, these conventional approaches often suffer from significant limitations, including complex fabrication setups, prolonged processing times, potential cell toxicity, or the requirement of specialized micro-chambers that hinder high-throughput applications. To address these challenges, this thesis puts forward a novel, non-contact, and rapid fabrication approach utilizing traveling and standing acoustic waves to arrange collagen fibers dynamically. This method enables the rapid in-Petri-dish fabrication of anisotropic biomaterials without the need for chemical additives or complex modifications. To develop these approaches, we systematically investigated the physical effects of acoustic waves on collagen self-assembly kinetics and the resulting micro/nanoscale architectures of the fabricated biomaterials using confocal fluorescence microscopy. Our mechanistic investigations reveal a dual-action acoustic effect. Specifically, traveling acoustic wave-induced fluid streaming actively transports collagen molecules, thereby accelerating and spatially directing the collagen self-assembly process. Concurrently, standing acoustic waves generate acoustic radiation forces that accumulate self-assembled collagen fibers, increasing their localized concentrations and aligning them into periodically distributed acoustic potential wells. This combined acoustic approach achieved a high degree of fiber alignment along the fluid flow within just 5 min. Using our acoustics-assisted approach, we successfully manufactured anisotropic collagen hydrogels containing highly aligned collagen fibers, which provide structurally biomimetic and anisotropic microenvironments for cell growth and development. To validate the biological functionality of these fabricated constructs, in vitro cell culture studies were conducted using U251 cells. Quantitative morphological analysis demonstrated that cells cultured in these hydrogels exhibited significant contact guidance, facilitating pronounced cell elongation and directional alignment along the acoustically arranged collagen fibers. Compared to previous methods, our acoustics-based approaches are remarkably easy to operate. They eliminate the requirement for customized microfluidic chambers for loading collagen and are capable of rapidly fabricating anisotropic collagen hydrogels directly in commercial Petri dishes. This unique advantage allows our approach to be readily integrated into existing standard laboratory workflows and seamlessly combined with other test protocols. In the long run, we expect this work to inspire the development of versatile, high-throughput tools that will significantly benefit biomedical researchers working in tissue engineering, regenerative medicine, biomaterials, and bioprinting.en
dc.description.abstractgeneralIn the human body, many tissues, such as tendons, muscles, and the cornea, possess highly organized, directional structures composed primarily of the protein collagen. When these tissues sustain damage, researchers and clinicians require artificial replacement materials that accurately replicate this complex, aligned architecture. Furthermore, such engineered materials are essential for modeling how cancer cells migrate throughout the body. However, manufacturing these highly ordered materials in a laboratory setting has traditionally been challenging, often demanding complex, cost-prohibitive equipment or the use of strong magnetic fields. In this thesis, we introduce a novel and accessible method for fabricating these organized biological materials utilizing acoustic waves. By harnessing specifically engineered sound waves, we can gently manipulate and align microscopic collagen fibers. This research investigates two distinct types of acoustic mechanisms: one generates localized fluid streams to transport the protein building blocks, while the other creates invisible acoustic boundaries that trap and assemble the fibers into highly ordered, parallel arrays. Through this acoustic-based approach, we successfully generated patterned collagen networks directly within standard laboratory culture dishes. When living cells were introduced to these engineered materials, they naturally oriented themselves along the acoustically formed pathways, elongating and growing in a manner that closely mimics cellular behavior in native human tissue. A primary advantage of this methodology is its operational simplicity. Because it bypasses the need for highly specialized or complex machinery, it can be readily integrated into standard biological laboratories. Ultimately, we anticipate that this acoustic technology will emerge as a versatile tool, enabling scientists to develop advanced materials for wound healing, ocular repair, and broader applications in regenerative medicine.en
dc.description.degreeMaster of Scienceen
dc.format.mediumETDen
dc.format.mimetypeapplication/pdfen
dc.identifier.urihttps://hdl.handle.net/10919/143109en
dc.publisherVirginia Techen
dc.rightsIn Copyrighten
dc.rights.urihttp://rightsstatements.org/vocab/InC/1.0/en
dc.subjectStanding acoustic wavesen
dc.subjecttraveling acoustic wavesen
dc.subjectacoustic streamingen
dc.subjectcollagen self-assemblyen
dc.subjectbiomaterial fabricationen
dc.titleAcoustic Assembly of Collagen Hydrogels in Petri Dishes: The Distinct Roles of Traveling and Standing Wavesen
dc.typeThesisen
dc.type.dcmitypeTexten
thesis.degree.disciplineBiomedical Engineeringen
thesis.degree.grantorVirginia Polytechnic Institute and State Universityen
thesis.degree.levelmastersen
thesis.degree.nameMaster of Scienceen

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