Parameterizing Lognormal state space models using moment matching
| dc.contributor.author | Smith, John W. | en |
| dc.contributor.author | Thomas, R. Quinn | en |
| dc.contributor.author | Johnson, Leah R. | en |
| dc.date.accessioned | 2023-12-13T19:41:43Z | en |
| dc.date.available | 2023-12-13T19:41:43Z | en |
| dc.date.issued | 2023-09 | en |
| dc.description.abstract | In ecology, it is common for processes to be bounded based on physical constraints of the system. One common example is the positivity constraint, which applies to phenomena such as duration times, population sizes, and total stock of a system’s commodity. In this paper, we propose a novel method for parameterizing Lognormal state space models using an approach based on moment matching. Our method enforces the positivity constraint, allows for arbitrary mean evolution and variance structure, and has a closed-form Markov transition density which allows for more flexibility in fitting techniques. We discuss two existing Lognormal state space models and examine how they differ from the method presented here. We use 180 synthetic datasets to compare the forecasting performance under model misspecification and assess the estimation of precision parameters between our method and existing methods. We find that our models perform well under misspecification, and that fixing the observation variance both helps to improve estimation of the process variance and improves forecast performance. To test our method on a difficult problem, we compare the predictive performance of two Lognormal state space models in predicting the Leaf Area Index over a 151 day horizon by using a process-based ecosystem model to describe the temporal dynamics. We find that our moment matching model performs better than its competitor, and is better suited for intermediate predictive horizons. Overall, our study helps to inform practitioners about the importance of incorporating sensible dynamics when using models of complex systems to predict out-of-sample. | en |
| dc.description.sponsorship | This work was supported by the National Science Foundation Grants DBI # 2016264, DMS/DEB # 1750113, and DEB # 1926388. | en |
| dc.description.version | Published version | en |
| dc.format.extent | Pages 385-419 | en |
| dc.format.mimetype | application/pdf | en |
| dc.identifier.doi | https://doi.org/10.1007/s10651-023-00570-x | en |
| dc.identifier.eissn | 1573-3009 | en |
| dc.identifier.issn | 1352-8505 | en |
| dc.identifier.issue | 3 | en |
| dc.identifier.orcid | Thomas, Robert [0000-0003-1282-7825] | en |
| dc.identifier.uri | https://hdl.handle.net/10919/117183 | en |
| dc.identifier.volume | 30 | en |
| dc.language.iso | en | en |
| dc.publisher | Springer | en |
| dc.rights | Creative Commons Attribution 4.0 International | en |
| dc.rights.uri | http://creativecommons.org/licenses/by/4.0/ | en |
| dc.subject | Bayesian statistics | en |
| dc.subject | Forecasting | en |
| dc.subject | MCMC | en |
| dc.subject | Particle filter | en |
| dc.subject | State space model | en |
| dc.title | Parameterizing Lognormal state space models using moment matching | en |
| dc.title.serial | Environmental and Ecological Statistics | en |
| dc.type | Article - Refereed | en |
| dc.type.dcmitype | Text | en |
| dc.type.other | Article | en |
| dc.type.other | Journal | en |
| pubs.organisational-group | /Virginia Tech | en |
| pubs.organisational-group | /Virginia Tech/Science | en |
| pubs.organisational-group | /Virginia Tech/Science/Biological Sciences | en |
| pubs.organisational-group | /Virginia Tech/All T&R Faculty | en |
| pubs.organisational-group | /Virginia Tech/Science/COS T&R Faculty | en |